Julie Dickerson

Title(s):

David C. Nicholas Professor

Office

3123 Coover
2520 Osborn Dr
Ames, IA 50011-1046

Information

Education:

Ph.D., Electrical Engineering, University of Southern California (1993)

M.S., Electrical Engineering, University of Southern California (1986)

B.S., Electrical Engineering, University of California, San Diego (1983)

Research Areas:

Core Area(s): Human-computer interaction, bioinformatics and computational biology, communications and signal processing, systems biology, bioinformatics, pattern recognition, data visualization, real-time sensor networks

Department’s Strategic Area(s): Data, decisions, networks & autonomy; bioengineering

Additional Information

Publications

Google Scholar Profile: https://scholar.google.com/citations?user=H92j-LIAAAAJ&hl=en

  • G Kandoi, JA Dickerson, “Tissue-specific mouse mRNA isoform networks”, Nature Scientific Reports, 9(1) 1-24, 2019.
  • R Liu, JA Dickerson, “Strawberry: Fast and accurate genome-guided transcript reconstruction and quantification from RNA-Seq,” PLoS Computational Biology, 13(11), e1005851.
  • Zhou WG, Dickerson JA, “A novel class dependent feature selection method for cancer biomarker discovery,” Computers in Biology and Medicine, 47(1), 66-75, 2014, http://dx.doi.org/10.1016/j.compbiomed.2014.01.014.
  • Royce, L, E Boggess, Y. Fu, P. Liu, JV Shanks, J.A. Dickerson, L Jarboe, “Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damage,” PLoS ONE, 2014.
  • Nucleic Acids Research, 2012 Database Issue,P. Bais*, S.M. Moon-Quanbeck, B.J. Nikolau, J.A. Dickerson, “Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics,” Nucleic Acids Research,  2012 Database Issue, doi: 10.1093/nar/gkr1006
  • P. Bais, S.M. Moon-Quanbeck, B.J. Nikolau, J.A. Dickerson, “Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics,” Nucleic Acids Research, 2012 Database Issue, doi: 10.1093/nar/gkr1006
  • Fu, Y., L.R. Jarboe, J.A. Dickerson, “Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities,” BMC Bioinformatics, 12:233, 2011, doi:10.1186/1471-2105-12-233.
  • Ming J., D. Reiners, E.S. Wurtele, J.A. Dickerson, “MetNetGE: Visualizing Biological Networks in Hierarchical Views and 3D Tiered Layouts,” BMC Bioinformatics 2010, 11:469 doi:10.1186/1471-2105-11-469, 2010.
  • JA Etzel, EL Johnsen, J.A. Dickerson, R Adolphs, “Cardiovascular and Respiratory Responses during Musical Mood Induction,” International Journal of Psychophysiology, 2006
  • P Du, J Gong, ES Wurtele, and J.A. Dickerson, “Modeling Gene Expression Networks using Fuzzy Logic,” Special issue of IEEE Transactions on Systems, Man and Cybernetics, Part B, 35(6):1351-1359, 2005

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